Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ISP_006393 | P96675 | Positive | 7208823 - 7209992 | 40168.9 |
| nad(p)h-binding protein | ISP_006394 | B1VN94 | Negative | 7209989 - 7210819 | 28960.7 |
| ftsq-type potra domain-containing protein | ISP_006395 | A0R014 | Negative | 7210897 - 7211736 | 30282.5 |
| udp-n-acetylmuramate--l-alanine ligase | ISP_006396 | A4FLV9 | Negative | 7211741 - 7213138 | 48291.6 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | ISP_006397 | A4FLW0 | Negative | 7213131 - 7214255 | 38294.7 |
| putative lipid ii flippase ftsw | ISP_006398 | P63763 | Negative | 7214252 - 7215763 | 53328.3 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | ISP_006399 | Q47QX1 | Negative | 7215750 - 7217159 | 48048.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ISP_006400 | A4FLW3 | Negative | 7217161 - 7218243 | 38489.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ISP_006401 | P0A5L5 | Negative | 7218240 - 7219742 | 51672.6 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | ISP_006402 | P65478 | Negative | 7219739 - 7221283 | 53049.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
