Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epoxide hydrolase | ISP_006363 | Q06816 | Negative | 7160346 - 7161476 | 41723.9 |
| tetr family transcriptional regulator | ISP_006364 | P75811 | Negative | 7161466 - 7162089 | 22715.2 |
| sdr family nad(p)-dependent oxidoreductase | ISP_006365 | Q8NBN7 | Negative | 7162034 - 7162990 | 33606.0 |
| helix-turn-helix transcriptional regulator | ISP_006366 | Not Available | Positive | 7163091 - 7163951 | 31574.6 |
| hypothetical protein | ISP_006367 | Not Available | Positive | 7164295 - 7164492 | 7137.17 |
| gaf and antar domain-containing protein | ISP_006368 | Not Available | Positive | 7164680 - 7165465 | 27857.9 |
| sigb/sigf/sigg family rna polymerase sigma factor | ISP_006369 | P9WGI2 | Positive | 7165554 - 7166375 | 30502.3 |
| atp-binding protein | ISP_006370 | Not Available | Positive | 7166478 - 7166906 | 15758.7 |
| m20/m25/m40 family metallo-hydrolase | ISP_006371 | Q7Z2K6 | Negative | 7166934 - 7169294 | 81356.5 |
| ornithine cyclodeaminase family protein | ISP_006372 | Q2G1N2 | Negative | 7169314 - 7170354 | 36428.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
