Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | ISP_006353 | Q0QLF5 | Negative | 7150914 - 7151831 | 32001.0 |
| aldehyde dehydrogenase family protein | ISP_006354 | P23883 | Negative | 7151833 - 7153323 | 53019.8 |
| mandelate racemase/muconate lactonizing enzyme family protein | ISP_006355 | A9CEQ8 | Negative | 7153311 - 7154420 | 40676.8 |
| formaldehyde-activating enzyme | ISP_006356 | Q8PXE1 | Negative | 7154417 - 7154977 | 18958.6 |
| iclr family transcriptional regulator | ISP_006357 | P76268 | Positive | 7155120 - 7155935 | 29651.3 |
| epoxide hydrolase | ISP_006358 | Q06816 | Positive | 7155986 - 7157107 | 41419.2 |
| helix-turn-helix transcriptional regulator | ISP_006359 | Not Available | Negative | 7157132 - 7157926 | 29615.6 |
| carboxymuconolactone decarboxylase family protein | ISP_006360 | Not Available | Negative | 7157919 - 7158488 | 20121.6 |
| alpha/beta hydrolase | ISP_006361 | Q8S8S9 | Negative | 7158583 - 7159278 | 24466.9 |
| helix-turn-helix domain-containing protein | ISP_006362 | Q9HTH5 | Negative | 7159357 - 7160307 | 34098.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
