Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ISP_006343 | O32198 | Negative | 7140778 - 7141911 | 40122.9 |
| chat domain-containing protein | ISP_006344 | Not Available | Negative | 7142015 - 7142455 | 15093.0 |
| nb-arc domain-containing protein | ISP_006345 | P25941 | Negative | 7142790 - 7144160 | 49916.8 |
| duf6454 family protein | ISP_006346 | Not Available | Positive | 7144371 - 7145369 | 35707.4 |
| nad(p)-dependent oxidoreductase | ISP_006347 | Q7CRQ0 | Negative | 7145391 - 7146170 | 27081.6 |
| is30 family transposase | ISP_006348 | Q8FMN9 | Negative | 7146368 - 7146979 | 21978.4 |
| class a beta-lactamase-related serine hydrolase | ISP_006349 | P65305 | Negative | 7147238 - 7148104 | 31330.4 |
| hypothetical protein | ISP_006350 | Not Available | Negative | 7148309 - 7149196 | 31810.9 |
| sige family rna polymerase sigma factor | ISP_006351 | Q82EA9 | Negative | 7149196 - 7149690 | 18554.1 |
| iron-containing alcohol dehydrogenase | ISP_006352 | P76553 | Negative | 7149772 - 7150902 | 38108.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
