Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nacht domain-containing protein | ISP_006323 | Not Available | Negative | 7122339 - 7124642 | 81894.9 |
| integrase | ISP_006324 | Not Available | Negative | 7125392 - 7125793 | 14496.3 |
| hypothetical protein | ISP_006325 | Not Available | Negative | 7125827 - 7126348 | 19199.4 |
| is30 family transposase | ISP_006326 | Not Available | Negative | 7126796 - 7126933 | 5353.44 |
| rna polymerase subunit sigma-70 | ISP_006327 | P9WGG4 | Negative | 7127152 - 7128126 | 35594.6 |
| ppox class f420-dependent oxidoreductase | ISP_006328 | O06553 | Positive | 7128215 - 7128685 | 17001.1 |
| fad-dependent oxidoreductase | ISP_006329 | P9WJJ1 | Positive | 7128868 - 7130076 | 42147.7 |
| marr family transcriptional regulator | ISP_006330 | Not Available | Positive | 7130224 - 7131093 | 30412.5 |
| esx secretion-associated protein espg | ISP_006331 | Not Available | Negative | 7131154 - 7131852 | 25239.2 |
| hypothetical protein | ISP_006332 | Not Available | Negative | 7131917 - 7133206 | 44413.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
