Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_006313 | Not Available | Negative | 7114173 - 7114445 | 9628.33 |
| gntr family transcriptional regulator | ISP_006314 | P9WMG6 | Positive | 7114562 - 7114909 | 12451.8 |
| hypothetical protein | ISP_006315 | Not Available | Negative | 7114906 - 7115106 | 6884.53 |
| xre family transcriptional regulator | ISP_006316 | P19471 | Positive | 7115242 - 7116657 | 50805.7 |
| aminoglycoside phosphotransferase family protein | ISP_006317 | Not Available | Negative | 7116617 - 7117507 | 33350.2 |
| gnat family n-acetyltransferase | ISP_006318 | Not Available | Negative | 7117599 - 7118228 | 23757.1 |
| hypothetical protein | ISP_006319 | Not Available | Positive | 7118336 - 7118638 | 10333.5 |
| tir domain-containing protein | ISP_006320 | J8G8J6 | Negative | 7119139 - 7119636 | 18338.5 |
| hypothetical protein | ISP_006321 | Not Available | Positive | 7119753 - 7120217 | 17633.5 |
| hit domain-containing protein | ISP_006322 | O07513 | Negative | 7120191 - 7120619 | 15914.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
