Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trai | ISP_006303 | Not Available | Negative | 7109691 - 7110875 | 41481.4 |
| conjugal transfer protein trah | ISP_006304 | Not Available | Negative | 7110872 - 7111204 | 11641.9 |
| hypothetical protein | ISP_006305 | Not Available | Negative | 7111197 - 7111511 | 11311.9 |
| hypothetical protein | ISP_006306 | Not Available | Negative | 7111511 - 7111741 | 8145.49 |
| hypothetical protein | ISP_006307 | Not Available | Negative | 7111738 - 7111905 | 5747.82 |
| hypothetical protein | ISP_006308 | Not Available | Negative | 7111908 - 7112126 | 8358.67 |
| ssga family sporulation/cell division regulator | ISP_006309 | Q2J7H0 | Negative | 7112210 - 7112590 | 13069.6 |
| nudix hydrolase | ISP_006310 | Q58549 | Negative | 7112581 - 7113105 | 18562.6 |
| hypothetical protein | ISP_006311 | Not Available | Negative | 7113145 - 7113828 | 24272.4 |
| hypothetical protein | ISP_006312 | Not Available | Negative | 7113935 - 7114171 | 8724.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
