Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ISP_006283 | P21629 | Positive | 7093477 - 7094250 | 28437.4 |
| abc transporter atp-binding protein | ISP_006284 | P21630 | Positive | 7094240 - 7094953 | 25575.3 |
| duf4352 domain-containing protein | ISP_006285 | Not Available | Negative | 7094999 - 7095523 | 18799.7 |
| response regulator | ISP_006286 | P9WGM2 | Negative | 7095558 - 7096172 | 22276.9 |
| Trna-leu | Not Available | Not Available | Positive | 7096426 - 7096499 | Not Available |
| tyrosine-type recombinase/integrase | ISP_006288 | Not Available | Negative | 7096657 - 7098057 | 51972.1 |
| helix-turn-helix domain-containing protein | ISP_006289 | Not Available | Negative | 7098054 - 7098239 | 7275.74 |
| duf3631 domain-containing protein | ISP_006290 | P22875 | Negative | 7098533 - 7099882 | 48526.4 |
| dna cytosine methyltransferase | ISP_006291 | Not Available | Negative | 7099938 - 7101563 | 58605.9 |
| hypothetical protein | ISP_006292 | Not Available | Negative | 7101560 - 7101910 | 12903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
