Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent oxidoreductase | ISP_006273 | Q7T3C7 | Positive | 7081004 - 7081930 | 32443.1 |
| serine protease | ISP_006274 | Not Available | Negative | 7082192 - 7083793 | 56616.5 |
| ef-hand domain-containing protein | ISP_006275 | Q9LF54 | Negative | 7083896 - 7084486 | 20692.1 |
| dna polymerase i | ISP_006276 | P0A551 | Negative | 7084588 - 7087329 | 100273.0 |
| hotdog fold thioesterase | ISP_006277 | C9XXI1 | Positive | 7087392 - 7087832 | 15036.9 |
| lysr family transcriptional regulator | ISP_006278 | P52670 | Positive | 7087838 - 7088809 | 35847.2 |
| lysophospholipase | ISP_006279 | Not Available | Negative | 7088775 - 7089545 | 26796.9 |
| branched-chain amino acid abc transporter substrate-binding protein | ISP_006280 | Q8G3D4 | Positive | 7090095 - 7091246 | 39384.4 |
| branched-chain amino acid abc transporter permease | ISP_006281 | P21627 | Positive | 7091358 - 7092326 | 34069.0 |
| branched-chain amino acid abc transporter permease | ISP_006282 | P21628 | Positive | 7092338 - 7093480 | 40902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
