Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | ISP_006253 | P83615 | Positive | 7061629 - 7063014 | 50637.5 |
| voc family protein | ISP_006254 | P0A5N9 | Positive | 7063075 - 7063464 | 13775.2 |
| excinuclease abc subunit b | ISP_006255 | P67423 | Negative | 7064013 - 7066145 | 80150.4 |
| hypothetical protein | ISP_006256 | Not Available | Negative | 7066215 - 7066370 | 5386.41 |
| hypothetical protein | ISP_006257 | Not Available | Negative | 7066417 - 7066821 | 14050.0 |
| duf5685 family protein | ISP_006258 | Not Available | Negative | 7066832 - 7068220 | 47234.9 |
| duf402 domain-containing protein | ISP_006259 | Not Available | Positive | 7068325 - 7068843 | 19588.3 |
| dephospho-coa kinase | ISP_006260 | Q740M4 | Negative | 7068897 - 7070081 | 42615.4 |
| hypothetical protein | ISP_006261 | Not Available | Positive | 7070386 - 7070652 | 9211.47 |
| hypothetical protein | ISP_006262 | Not Available | Positive | 7070776 - 7071024 | 8928.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
