Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase-like hydrolase | ISP_006243 | Not Available | Negative | 7050308 - 7050457 | 5228.08 |
| ycii family protein | ISP_006244 | Not Available | Negative | 7050592 - 7050924 | 11903.1 |
| s9 family peptidase | ISP_006245 | P39839 | Negative | 7050965 - 7052911 | 69524.7 |
| terc family protein | ISP_006246 | P96554 | Negative | 7052963 - 7053925 | 35470.2 |
| alpha/beta fold hydrolase | ISP_006247 | P42332 | Positive | 7054230 - 7057094 | 96698.5 |
| is110 family transposase | ISP_006248 | P14707 | Negative | 7057124 - 7058365 | 44682.3 |
| abc transporter permease | ISP_006249 | Not Available | Positive | 7058682 - 7059608 | 32727.9 |
| hypothetical protein | ISP_006250 | Not Available | Positive | 7059636 - 7060109 | 17256.3 |
| enoyl-coa hydratase/isomerase family protein | ISP_006251 | A0QJH8 | Positive | 7060141 - 7060881 | 26297.5 |
| srpbcc family protein | ISP_006252 | Not Available | Negative | 7060878 - 7061381 | 18015.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
