Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylesterase family protein | ISP_006233 | Q47M62 | Negative | 7040235 - 7041620 | 49893.3 |
| nuclear transport factor 2 family protein | ISP_006234 | P9WM92 | Positive | 7041695 - 7042102 | 14933.5 |
| na+/h+ antiporter | ISP_006235 | P9WJI2 | Positive | 7042136 - 7044019 | 67696.4 |
| histidine phosphatase family protein | ISP_006236 | Q9SCS3 | Positive | 7044030 - 7044716 | 25189.6 |
| abc transporter permease | ISP_006237 | Q5W7C1 | Negative | 7044700 - 7045443 | 24493.9 |
| mmps family protein | ISP_006238 | Not Available | Negative | 7045461 - 7045934 | 16308.4 |
| helix-turn-helix domain-containing protein | ISP_006239 | P43458 | Positive | 7046151 - 7047014 | 29892.4 |
| laci family transcriptional regulator | ISP_006240 | Q9K6K2 | Positive | 7047121 - 7048098 | 34642.1 |
| dna-binding protein | ISP_006241 | Not Available | Positive | 7049037 - 7049618 | 20827.7 |
| res family nad+ phosphorylase | ISP_006242 | Not Available | Positive | 7049670 - 7050326 | 23844.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
