Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trypsin-like serine protease | ISP_000042 | Q1JRP2 | Negative | 40612 - 41364 | 25151.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ISP_000043 | P28725 | Negative | 41516 - 41890 | 12902.4 |
| penicillin acylase family protein | ISP_000044 | P31956 | Positive | 42032 - 45250 | 113841.0 |
| plp-dependent transferase | ISP_000045 | Q59829 | Positive | 45309 - 46349 | 36445.5 |
| hypothetical protein | ISP_000046 | Not Available | Positive | 46411 - 47208 | 26249.8 |
| class f sortase | ISP_000047 | Not Available | Positive | 47205 - 47789 | 20244.5 |
| patatin-like phospholipase family protein | ISP_000048 | Not Available | Negative | 47775 - 48755 | 36120.4 |
| fadr family transcriptional regulator | ISP_000049 | G0E1Z6 | Negative | 48936 - 49679 | 27121.7 |
| abc transporter substrate-binding protein | ISP_000050 | A0A0H2ZGW2 | Positive | 49807 - 51297 | 53842.1 |
| abc transporter permease | ISP_000051 | Q57RB0 | Positive | 51294 - 52238 | 33156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
