Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssga family sporulation/cell division regulator | ISP_000372 | Q2J7H0 | Negative | 367508 - 367888 | 13136.7 |
| nudix hydrolase | ISP_000373 | Q58549 | Negative | 367879 - 368310 | 15153.6 |
| hypothetical protein | ISP_000374 | Not Available | Negative | 368444 - 369130 | 24488.7 |
| hypothetical protein | ISP_000375 | Not Available | Negative | 369237 - 369473 | 8792.58 |
| hypothetical protein | ISP_000376 | Not Available | Negative | 369475 - 369732 | 9195.76 |
| gntr family transcriptional regulator | ISP_000377 | Q01856 | Positive | 369853 - 370200 | 12434.8 |
| hypothetical protein | ISP_000378 | Not Available | Negative | 370197 - 370400 | 6727.43 |
| helix-turn-helix domain-containing protein | ISP_000379 | Not Available | Positive | 370573 - 371322 | 27796.2 |
| nudix domain-containing protein | ISP_000380 | P46351 | Positive | 371328 - 371804 | 17809.0 |
| hd domain-containing protein | ISP_000381 | Not Available | Negative | 371796 - 372368 | 20809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
