Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ISP_000342 | Q47421 | Positive | 345324 - 346658 | 47643.2 |
| hypothetical protein | ISP_000343 | Not Available | Negative | 346740 - 347237 | 16712.7 |
| sige family rna polymerase sigma factor | ISP_000344 | P38133 | Negative | 347243 - 347794 | 20503.4 |
| hypothetical protein | ISP_000345 | Not Available | Negative | 347799 - 348113 | 10546.8 |
| ig-like domain-containing protein | ISP_000346 | P64704 | Negative | 348283 - 349494 | 42467.8 |
| cold-shock protein | ISP_000347 | A0R5E1 | Positive | 349952 - 350155 | 7461.7 |
| hypothetical protein | ISP_000348 | Not Available | Negative | 350267 - 350710 | 15877.3 |
| hypothetical protein | ISP_000349 | Not Available | Positive | 351418 - 351672 | 8827.39 |
| hypothetical protein | ISP_000350 | Not Available | Positive | 351832 - 352608 | 27772.2 |
| Trna-glu | Not Available | Not Available | Positive | 352726 - 352798 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
