Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | ISP_003264 | P37959 | Negative | 3421895 - 3422725 | 29460.7 |
| esterase family protein | ISP_003265 | P0C1D7 | Negative | 3422722 - 3423726 | 35964.9 |
| hypothetical protein | ISP_003266 | Not Available | Positive | 3424113 - 3424781 | 22421.0 |
| fatty acyl-amp ligase | ISP_003267 | B2HIN2 | Positive | 3424800 - 3426521 | 59925.4 |
| type i polyketide synthase | ISP_003268 | I6X8D2 | Positive | 3426518 - 3430783 | 149179.0 |
| mfs transporter | ISP_003269 | D0ZXQ3 | Positive | 3430780 - 3432225 | 47757.1 |
| marr family winged helix-turn-helix transcriptional regulator | ISP_003270 | O31472 | Negative | 3432251 - 3432709 | 16025.4 |
| nitroreductase family deazaflavin-dependent oxidoreductase | ISP_003271 | Not Available | Positive | 3432764 - 3433207 | 15789.9 |
| fad-dependent oxidoreductase | ISP_003272 | Q3S8R0 | Positive | 3433204 - 3434403 | 43283.9 |
| srpbcc family protein | ISP_003273 | Not Available | Negative | 3434373 - 3434834 | 16645.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
