Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ISP_003224 | Not Available | Negative | 3377110 - 3377709 | 21177.5 |
| aldo/keto reductase | ISP_003225 | P25906 | Positive | 3377795 - 3378691 | 31308.7 |
| helix-turn-helix domain-containing protein | ISP_003226 | Q9HTH5 | Positive | 3378752 - 3379693 | 33735.4 |
| aldo/keto reductase | ISP_003227 | O05408 | Negative | 3379653 - 3380711 | 37865.4 |
| duf6292 family protein | ISP_003228 | Not Available | Negative | 3381184 - 3381624 | 15556.4 |
| duf6292 family protein | ISP_003229 | Not Available | Positive | 3381826 - 3382263 | 15631.6 |
| diviva domain-containing protein | ISP_003230 | Not Available | Positive | 3382260 - 3382799 | 19824.3 |
| fad-binding oxidoreductase | ISP_003231 | Q5BQE6 | Positive | 3382900 - 3384306 | 53805.1 |
| class i sam-dependent methyltransferase | ISP_003232 | O69687 | Positive | 3384318 - 3385583 | 46515.5 |
| cold-shock protein | ISP_003233 | P48859 | Positive | 3385684 - 3385887 | 7219.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
