Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-arabinofuranosidase b | ISP_003214 | Q0CEE5 | Positive | 3366486 - 3368042 | 53827.1 |
| hypothetical protein | ISP_003215 | Q93HT9 | Positive | 3368407 - 3368580 | 5574.65 |
| gdsl-type esterase/lipase family protein | ISP_003216 | Not Available | Positive | 3368645 - 3369883 | 42660.3 |
| hypothetical protein | ISP_003217 | Not Available | Negative | 3369898 - 3370056 | 5454.51 |
| laci family transcriptional regulator | ISP_003218 | Q9Z3R4 | Negative | 3370174 - 3371187 | 35695.7 |
| abc transporter substrate-binding protein | ISP_003219 | P59214 | Positive | 3371351 - 3372598 | 42191.5 |
| sugar abc transporter permease | ISP_003220 | Q8FVS6 | Positive | 3372607 - 3373551 | 34495.3 |
| carbohydrate abc transporter permease | ISP_003221 | Q9K489 | Positive | 3373548 - 3374357 | 28680.4 |
| glycogen debranching protein | ISP_003222 | D8T3S4 | Positive | 3374384 - 3376090 | 60945.9 |
| hypothetical protein | ISP_003223 | B8N3L3 | Positive | 3376260 - 3376952 | 24378.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
