Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carotenoid oxygenase family protein | ISP_003134 | A4XES9 | Negative | 3293475 - 3294755 | 47344.6 |
| hypothetical protein | ISP_003135 | Not Available | Negative | 3294752 - 3295312 | 20263.0 |
| padr family transcriptional regulator | ISP_003136 | P94443 | Positive | 3295403 - 3295915 | 19222.9 |
| zf-hc2 domain-containing protein | ISP_003137 | P9WM68 | Negative | 3295947 - 3296633 | 23635.4 |
| sigma-70 family rna polymerase sigma factor | ISP_003138 | P66810 | Positive | 3296691 - 3297242 | 20065.8 |
| molybdopterin-dependent oxidoreductase | ISP_003139 | Q51698 | Positive | 3297407 - 3299653 | 79376.3 |
| (2fe-2s)-binding protein | ISP_003140 | Q51697 | Positive | 3299665 - 3300123 | 16387.7 |
| helix-turn-helix domain-containing protein | ISP_003141 | P9WPH4 | Positive | 3300259 - 3301482 | 43965.1 |
| hypothetical protein | ISP_003142 | Not Available | Negative | 3301479 - 3301754 | 10164.9 |
| tigr03564 family f420-dependent llm class oxidoreductase | ISP_003143 | O53565 | Negative | 3301751 - 3302620 | 30245.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
