Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_003124 | Not Available | Positive | 3285851 - 3286033 | 6454.31 |
| glycoside hydrolase family 65 protein | ISP_003125 | P9WN12 | Negative | 3286014 - 3288413 | 88801.8 |
| beta-phosphoglucomutase family hydrolase | ISP_003126 | P9WKZ6 | Negative | 3288410 - 3289141 | 25835.4 |
| metalloregulator arsr/smtb family transcription factor | ISP_003127 | Q55940 | Negative | 3289151 - 3289510 | 12907.5 |
| paai family thioesterase | ISP_003128 | Q8ZXD8 | Positive | 3289635 - 3290135 | 17396.8 |
| nuclear transport factor 2 family protein | ISP_003129 | Not Available | Negative | 3290125 - 3290445 | 11533.7 |
| marr family transcriptional regulator | ISP_003130 | Not Available | Negative | 3290496 - 3290972 | 17312.9 |
| pyridoxamine 5'-phosphate oxidase family protein | ISP_003131 | Not Available | Positive | 3290971 - 3291432 | 17309.6 |
| rok family protein | ISP_003132 | D2PPN2 | Negative | 3291429 - 3292628 | 40768.9 |
| duf427 domain-containing protein | ISP_003133 | Not Available | Positive | 3292729 - 3293469 | 27451.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
