Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | ISP_003114 | B5XQH2 | Positive | 3269920 - 3271263 | 47823.1 |
| hypothetical protein | ISP_003115 | Not Available | Positive | 3271527 - 3271877 | 12380.7 |
| signal peptidase ii | ISP_003116 | Q0SHT6 | Positive | 3272066 - 3272686 | 21850.0 |
| rlua family pseudouridine synthase | ISP_003117 | P9WHQ2 | Positive | 3272683 - 3273612 | 33236.8 |
| asnc family protein | ISP_003118 | Not Available | Negative | 3273609 - 3274610 | 34864.1 |
| duf885 domain-containing protein | ISP_003119 | Not Available | Positive | 3274745 - 3281374 | 242227.0 |
| fumarylacetoacetase | ISP_003120 | P16930 | Positive | 3281338 - 3282582 | 44134.9 |
| llm class f420-dependent oxidoreductase | ISP_003121 | O53565 | Positive | 3282614 - 3283654 | 37205.9 |
| class f sortase | ISP_003122 | Not Available | Negative | 3284036 - 3284611 | 18791.7 |
| exopolyphosphatase | ISP_003123 | Q9X8H1 | Positive | 3284868 - 3285809 | 33293.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
