Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein sepf | ISP_003104 | A4FLU1 | Positive | 3257179 - 3257781 | 22448.2 |
| yggt family protein | ISP_003105 | Not Available | Positive | 3257897 - 3258172 | 10374.2 |
| diviva domain-containing protein | ISP_003106 | P0A5N3 | Positive | 3258225 - 3259079 | 31208.1 |
| hypothetical protein | ISP_003107 | Not Available | Positive | 3259204 - 3259788 | 20550.2 |
| metalloregulator arsr/smtb family transcription factor | ISP_003108 | P96683 | Negative | 3259969 - 3260715 | 25994.2 |
| mfs transporter | ISP_003109 | P9WG90 | Positive | 3260780 - 3262102 | 43767.5 |
| isoleucine--trna ligase | ISP_003110 | Q740U6 | Positive | 3262337 - 3265495 | 116824.0 |
| penicillin-binding transpeptidase domain-containing protein | ISP_003111 | A0QNG3 | Positive | 3265579 - 3267204 | 54745.8 |
| metalloregulator arsr/smtb family transcription factor | ISP_003112 | P96683 | Positive | 3267419 - 3268111 | 23959.1 |
| potassium/proton antiporter | ISP_003113 | Q0ZAH6 | Positive | 3268209 - 3269687 | 51281.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
