Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | ISP_003094 | P14706 | Positive | 3248069 - 3248575 | 18888.1 |
| duf1295 domain-containing protein | ISP_003095 | O74507 | Negative | 3248562 - 3249323 | 28176.9 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | ISP_003096 | O69687 | Negative | 3249326 - 3250591 | 46369.6 |
| fad-dependent oxidoreductase | ISP_003097 | Not Available | Positive | 3250674 - 3251942 | 45839.4 |
| duf1365 domain-containing protein | ISP_003098 | Not Available | Positive | 3251936 - 3252670 | 27626.6 |
| ecf rna polymerase sigma factor sigk | ISP_003099 | A1TEV0 | Positive | 3252663 - 3253277 | 23009.4 |
| anti-sigma factor | ISP_003100 | A3Q5U1 | Positive | 3253274 - 3254044 | 26158.4 |
| cell division protein ftsz | ISP_003101 | P64171 | Positive | 3254287 - 3255591 | 43878.9 |
| peptidoglycan editing factor pgef | ISP_003102 | P67257 | Positive | 3255666 - 3256370 | 24465.2 |
| yggs family pyridoxal phosphate-dependent enzyme | ISP_003103 | Q9CCE2 | Positive | 3256367 - 3257080 | 24980.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
