Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | ISP_000292 | P66812 | Positive | 294270 - 294875 | 22483.0 |
| carboxypeptidase regulatory-like domain-containing protein | ISP_000293 | Not Available | Positive | 294872 - 295351 | 16982.3 |
| polysaccharide deacetylase family protein | ISP_000294 | P40179 | Negative | 295348 - 296097 | 27304.4 |
| srpbcc family protein | ISP_000295 | P16560 | Negative | 296212 - 296661 | 16441.7 |
| fusc family protein | ISP_000296 | P75870 | Positive | 296730 - 298697 | 68524.0 |
| antitoxin | ISP_000297 | Not Available | Positive | 298721 - 298924 | 7379.46 |
| prephenate dehydrogenase | ISP_000298 | O69721 | Negative | 298925 - 299878 | 32205.4 |
| nadph-dependent 2,4-dienoyl-coa reductase | ISP_000299 | P42593 | Negative | 299929 - 301941 | 71950.5 |
| padr family transcriptional regulator | ISP_000300 | P94443 | Negative | 302015 - 302560 | 20497.5 |
| patatin family protein | ISP_000301 | P39407 | Positive | 302665 - 303603 | 33584.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
