Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | ISP_003064 | O59188 | Positive | 3217256 - 3218221 | 34639.6 |
| duf6338 family protein | ISP_003065 | Not Available | Positive | 3218272 - 3218964 | 25226.6 |
| hypothetical protein | ISP_003066 | Not Available | Positive | 3218927 - 3219121 | 6428.21 |
| chat domain-containing protein | ISP_003067 | Not Available | Negative | 3219165 - 3222713 | 126904.0 |
| hypothetical protein | ISP_003068 | Not Available | Negative | 3222813 - 3226106 | 117570.0 |
| alpha/beta hydrolase | ISP_003069 | I6XU97 | Negative | 3226223 - 3227413 | 41878.4 |
| tetr/acrr family transcriptional regulator | ISP_003070 | Q2T6C8 | Positive | 3227499 - 3228077 | 20393.3 |
| hypothetical protein | ISP_003071 | Not Available | Positive | 3228203 - 3229021 | 29121.7 |
| hypothetical protein | ISP_003072 | Not Available | Negative | 3229018 - 3229446 | 14140.7 |
| marr family transcriptional regulator | ISP_003073 | Not Available | Positive | 3229511 - 3229999 | 17633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
