Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside deaminase | ISP_003044 | Q12178 | Negative | 3194652 - 3195110 | 16459.6 |
| yafy family transcriptional regulator | ISP_003045 | O34920 | Positive | 3195222 - 3196178 | 34352.2 |
| winged helix dna-binding domain-containing protein | ISP_003046 | Not Available | Negative | 3196260 - 3197351 | 39123.0 |
| tetr/acrr family transcriptional regulator | ISP_003047 | Q0S7V2 | Negative | 3197391 - 3198005 | 22445.1 |
| ketoacyl-acp synthase iii | ISP_003048 | Q9ZBV4 | Negative | 3198129 - 3199067 | 32059.3 |
| tetr/acrr family transcriptional regulator | ISP_003049 | Q93PU7 | Positive | 3199128 - 3199721 | 21756.5 |
| ricin domain-containing protein | ISP_003050 | O54161 | Negative | 3200106 - 3201587 | 52487.9 |
| is30 family transposase | ISP_003051 | Not Available | Positive | 3201917 - 3202297 | 13280.4 |
| hypothetical protein | ISP_003052 | Not Available | Negative | 3202497 - 3205538 | 112260.0 |
| hypothetical protein | ISP_003053 | Not Available | Positive | 3205665 - 3206402 | 26134.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
