Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | ISP_003034 | P9WQG2 | Positive | 3184814 - 3185980 | 41359.5 |
| nad(p)-dependent oxidoreductase | ISP_003035 | Q6P5L8 | Positive | 3185989 - 3186825 | 29452.3 |
| tetr/acrr family transcriptional regulator | ISP_003036 | O33453 | Positive | 3186822 - 3187424 | 21993.3 |
| hypothetical protein | ISP_003037 | Not Available | Positive | 3187548 - 3187805 | 8521.28 |
| murein biosynthesis integral membrane protein murj | ISP_003038 | P9WJK2 | Positive | 3187913 - 3189673 | 61681.9 |
| hypothetical protein | ISP_003039 | Not Available | Positive | 3189873 - 3190379 | 17821.4 |
| chitinase | ISP_003040 | P14529 | Negative | 3190453 - 3191403 | 33190.1 |
| ggdef domain-containing protein | ISP_003041 | Q9A5I5 | Positive | 3191734 - 3193014 | 44078.3 |
| hypothetical protein | ISP_003042 | Not Available | Positive | 3193334 - 3193603 | 9244.2 |
| isopenicillin n synthase family oxygenase | ISP_003043 | Q15JG7 | Negative | 3193607 - 3194569 | 35338.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
