Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit alpha | ISP_003024 | Q9PL93 | Negative | 3169111 - 3172029 | 107477.0 |
| acetoacetate decarboxylase family protein | ISP_003025 | Not Available | Negative | 3172266 - 3172850 | 20838.0 |
| enoyl-coa hydratase-related protein | ISP_003026 | Q589W8 | Negative | 3172847 - 3173686 | 30132.1 |
| hypothetical protein | ISP_003027 | Not Available | Negative | 3173712 - 3174044 | 11620.9 |
| heat repeat domain-containing protein | ISP_003028 | Not Available | Positive | 3174132 - 3177515 | 122246.0 |
| tigr03084 family metal-binding protein | ISP_003029 | P9WM90 | Positive | 3177644 - 3178435 | 28425.3 |
| duf1446 domain-containing protein | ISP_003030 | Not Available | Positive | 3178432 - 3180120 | 59369.7 |
| acyl-coa dehydrogenase family protein | ISP_003031 | P28330 | Positive | 3180117 - 3181265 | 41600.4 |
| acyl-coa carboxylase subunit beta | ISP_003032 | O86318 | Positive | 3181262 - 3182860 | 56937.1 |
| biotin/lipoyl-binding protein | ISP_003033 | P0A509 | Positive | 3182868 - 3184817 | 68758.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
