Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8 family serine peptidase | ISP_003004 | P81715 | Positive | 3145739 - 3148627 | 96841.8 |
| hypothetical protein | ISP_003005 | Not Available | Positive | 3148688 - 3149335 | 23092.6 |
| atp-binding cassette domain-containing protein | ISP_003006 | A0A0H2VBH0 | Positive | 3149473 - 3151101 | 58331.5 |
| helix-turn-helix domain-containing protein | ISP_003007 | Not Available | Positive | 3151280 - 3151489 | 7506.13 |
| glycosyltransferase 87 family protein | ISP_003008 | Not Available | Negative | 3151476 - 3152858 | 48030.5 |
| llm class flavin-dependent oxidoreductase | ISP_003009 | E8NCH3 | Negative | 3152892 - 3153746 | 30621.7 |
| marr family transcriptional regulator | ISP_003010 | O33817 | Positive | 3153818 - 3154249 | 15538.9 |
| abc transporter atp-binding protein/permease | ISP_003011 | Q2LVL0 | Positive | 3154348 - 3156219 | 67013.6 |
| beta-lactamase family protein | ISP_003012 | Q09621 | Negative | 3156364 - 3157524 | 40709.9 |
| sis domain-containing protein | ISP_003013 | Q927J4 | Negative | 3157648 - 3158376 | 25276.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
