Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | ISP_002994 | Q8KHE4 | Negative | 3137000 - 3138193 | 42370.5 |
| is30 family transposase | ISP_002995 | Not Available | Positive | 3138242 - 3138375 | 4975.97 |
| is30 family transposase | ISP_002996 | Not Available | Negative | 3138606 - 3138707 | 3386.09 |
| hypothetical protein | ISP_002997 | Not Available | Negative | 3138897 - 3139292 | 14541.5 |
| hypothetical protein | ISP_002998 | Not Available | Negative | 3139334 - 3139960 | 22928.4 |
| ggdef domain-containing protein | ISP_002999 | P55552 | Negative | 3140285 - 3141958 | 58204.1 |
| metalloregulator arsr/smtb family transcription factor | ISP_003000 | O53478 | Positive | 3142085 - 3142432 | 12971.5 |
| srpbcc family protein | ISP_003001 | Not Available | Positive | 3142429 - 3143064 | 22928.8 |
| pasta domain-containing protein | ISP_003002 | Q8NU98 | Negative | 3143061 - 3143423 | 12506.7 |
| dntp triphosphohydrolase | ISP_003003 | A0QEC2 | Positive | 3143485 - 3145047 | 55899.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
