Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal 5'-phosphate synthase | ISP_000012 | B7UXE2 | Negative | 14154 - 14792 | 23502.5 |
| hypothetical protein | ISP_000013 | Not Available | Negative | 14794 - 15444 | 22563.9 |
| duf2020 domain-containing protein | ISP_000014 | Not Available | Positive | 15527 - 16057 | 17857.2 |
| hypothetical protein | ISP_000015 | Not Available | Positive | 16204 - 16656 | 15958.9 |
| hypothetical protein | ISP_000016 | Not Available | Negative | 16725 - 17261 | 18909.0 |
| peptidylprolyl isomerase | ISP_000017 | P65763 | Positive | 17351 - 17875 | 18666.8 |
| rhomboid family intramembrane serine protease | ISP_000018 | P54493 | Positive | 18066 - 18866 | 28506.0 |
| ph domain-containing protein | ISP_000019 | P9WMA2 | Negative | 18863 - 19276 | 14789.7 |
| cell division protein crga | ISP_000020 | A3PSE8 | Negative | 19347 - 19613 | 9837.51 |
| class e sortase | ISP_000021 | Q9XA14 | Positive | 19854 - 20912 | 37705.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
