Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufd | ISP_002974 | P9WFP4 | Positive | 3118722 - 3119894 | 42100.4 |
| fe-s cluster assembly atpase sufc | ISP_002975 | P80866 | Positive | 3119923 - 3120693 | 27846.4 |
| cysteine desulfurase | ISP_002976 | P63517 | Positive | 3120734 - 3122023 | 45466.2 |
| suf system nifu family fe-s cluster assembly protein | ISP_002977 | Q9A1G2 | Positive | 3122020 - 3122469 | 16224.1 |
| metal-sulfur cluster assembly factor | ISP_002978 | P70949 | Positive | 3122466 - 3122867 | 14526.9 |
| duf4184 family protein | ISP_002979 | Not Available | Negative | 3122875 - 3123621 | 26769.0 |
| ynfa family protein | ISP_002980 | Q82E60 | Positive | 3123669 - 3124001 | 11575.4 |
| signal peptidase i | ISP_002981 | P41027 | Positive | 3124031 - 3124810 | 27492.3 |
| aarf/ubib family protein | ISP_002982 | P73627 | Negative | 3124734 - 3126680 | 68876.5 |
| snapalysin family zinc-dependent metalloprotease | ISP_002983 | P0A3Z8 | Positive | 3126864 - 3127403 | 18371.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
