Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | ISP_002944 | A4FBM6 | Positive | 3087260 - 3088045 | 27832.4 |
| preprotein translocase subunit secg | ISP_002945 | P66792 | Positive | 3088173 - 3088403 | 7876.14 |
| rna polymerase-binding protein rbpa | ISP_002946 | Q9RKY0 | Positive | 3088511 - 3088855 | 12583.7 |
| histidine kinase | ISP_002947 | P94438 | Negative | 3089448 - 3090647 | 43394.5 |
| 6-phosphogluconolactonase | ISP_002948 | Q9XAB7 | Negative | 3091039 - 3091818 | 27235.2 |
| glucose-6-phosphate dehydrogenase assembly protein opca | ISP_002949 | Not Available | Negative | 3091815 - 3092885 | 37034.9 |
| glucose-6-phosphate dehydrogenase | ISP_002950 | P0A585 | Negative | 3092882 - 3094405 | 56665.3 |
| glucose-6-phosphate isomerase | ISP_002951 | Q5UXU0 | Negative | 3094402 - 3096024 | 55749.4 |
| transaldolase | ISP_002952 | A0QWX9 | Negative | 3096033 - 3097145 | 40315.2 |
| transketolase | ISP_002953 | P59956 | Negative | 3097160 - 3099262 | 75361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
