Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_002934 | Not Available | Positive | 3074313 - 3075770 | 53408.4 |
| hypothetical protein | ISP_002935 | Not Available | Positive | 3075770 - 3076570 | 28595.8 |
| hypothetical protein | ISP_002936 | Not Available | Positive | 3076582 - 3081048 | 160741.0 |
| tigr03620 family f420-dependent llm class oxidoreductase | ISP_002937 | Not Available | Positive | 3081086 - 3081871 | 27712.1 |
| nuclear transport factor 2 family protein | ISP_002938 | Not Available | Negative | 3081868 - 3082350 | 17525.4 |
| helix-turn-helix domain-containing protein | ISP_002939 | O31480 | Positive | 3082386 - 3082730 | 12377.0 |
| lyse family translocator | ISP_002940 | Q9KVK7 | Negative | 3082711 - 3083355 | 21863.3 |
| winged helix dna-binding domain-containing protein | ISP_002941 | Not Available | Positive | 3083427 - 3084608 | 42531.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | ISP_002942 | A0QWW2 | Positive | 3085037 - 3086041 | 35096.8 |
| phosphoglycerate kinase | ISP_002943 | A4FBM5 | Positive | 3086046 - 3087260 | 41860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
