Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | ISP_002924 | P9WMU4 | Positive | 3063598 - 3064590 | 34007.5 |
| dna-binding protein whia | ISP_002925 | A4FBM2 | Positive | 3064590 - 3065582 | 35485.7 |
| glucosyl-3-phosphoglycerate synthase | ISP_002926 | A0R2E6 | Positive | 3065742 - 3066746 | 35931.7 |
| sterol desaturase family protein | ISP_002927 | P68434 | Negative | 3066750 - 3067610 | 32982.1 |
| tetr/acrr family transcriptional regulator | ISP_002928 | O69786 | Positive | 3067681 - 3068289 | 21875.2 |
| hypothetical protein | ISP_002929 | Not Available | Negative | 3068317 - 3069435 | 40596.4 |
| hypothetical protein | ISP_002930 | Not Available | Positive | 3069599 - 3069967 | 13679.3 |
| pqq-dependent sugar dehydrogenase | ISP_002931 | P20533 | Negative | 3070034 - 3072667 | 90163.0 |
| coproporphyrinogen iii oxidase | ISP_002932 | Q7NEK3 | Negative | 3072917 - 3073750 | 30723.0 |
| ppox class f420-dependent oxidoreductase | ISP_002933 | Not Available | Negative | 3073789 - 3074226 | 16207.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
