Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ISP_002914 | P94438 | Negative | 3053987 - 3055186 | 41297.3 |
| ribulose-phosphate 3-epimerase | ISP_002915 | P65761 | Positive | 3055309 - 3055980 | 23201.7 |
| riboflavin synthase | ISP_002916 | P65328 | Positive | 3056073 - 3056702 | 21823.9 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | ISP_002917 | Q5YTP3 | Positive | 3056699 - 3058027 | 47400.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | ISP_002918 | A4FBK5 | Positive | 3058024 - 3058530 | 17848.1 |
| ph domain-containing protein | ISP_002919 | P9WLY0 | Positive | 3058527 - 3058970 | 16000.9 |
| exodeoxyribonuclease iii | ISP_002920 | P09030 | Negative | 3058977 - 3059753 | 28265.2 |
| trypsin-like serine protease | ISP_002921 | P35004 | Negative | 3059827 - 3060549 | 23974.9 |
| excinuclease abc subunit uvrc | ISP_002922 | Q5YTP9 | Positive | 3060741 - 3062696 | 72107.8 |
| rnase adapter rapz | ISP_002923 | A4FBM0 | Positive | 3062739 - 3063596 | 31399.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
