Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_002904 | Not Available | Positive | 3041074 - 3041940 | 30679.8 |
| coth kinase family protein | ISP_002905 | Not Available | Negative | 3041942 - 3043600 | 60077.8 |
| hypothetical protein | ISP_002906 | Q9I783 | Negative | 3043790 - 3045139 | 47111.0 |
| gamma-glutamyltransferase | ISP_002907 | P18956 | Positive | 3045343 - 3047139 | 62373.6 |
| methionyl-trna formyltransferase | ISP_002908 | A4FBJ4 | Positive | 3047489 - 3048415 | 32286.0 |
| rrna small subunit methyltransferase b | ISP_002909 | P9WGX2 | Positive | 3048412 - 3049836 | 50803.3 |
| flavoprotein | ISP_002910 | Not Available | Positive | 3049833 - 3050339 | 17655.2 |
| beta-lactamase family protein | ISP_002911 | P15555 | Negative | 3050552 - 3051667 | 38409.0 |
| alkaline phosphatase | ISP_002912 | P19147 | Negative | 3051770 - 3053164 | 47717.0 |
| response regulator transcription factor | ISP_002913 | P55184 | Negative | 3053331 - 3053990 | 23122.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
