Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro peptidase family protein | ISP_002884 | P54518 | Positive | 3021139 - 3022227 | 37993.9 |
| elongation factor p | ISP_002885 | A4FBF7 | Positive | 3022273 - 3022836 | 20434.2 |
| transcription antitermination factor nusb | ISP_002886 | A4FBF8 | Positive | 3022836 - 3023291 | 16555.8 |
| voc family protein | ISP_002887 | Not Available | Negative | 3023315 - 3023674 | 12622.5 |
| transcriptional regulator | ISP_002888 | Not Available | Negative | 3023871 - 3024359 | 17694.3 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | ISP_002889 | A4QEI8 | Positive | 3024659 - 3025222 | 20032.0 |
| aspartate carbamoyltransferase catalytic subunit | ISP_002890 | A4FBG1 | Positive | 3025219 - 3026166 | 33285.1 |
| dihydroorotase | ISP_002891 | P9WHL2 | Positive | 3026163 - 3027449 | 45268.7 |
| transporter | ISP_002892 | Not Available | Positive | 3027449 - 3027943 | 18153.9 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | ISP_002893 | Q741H2 | Positive | 3027940 - 3029061 | 40087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
