Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | ISP_000272 | Q5BK17 | Negative | 279544 - 280182 | 23500.2 |
| aldo/keto reductase | ISP_000273 | P80874 | Negative | 280201 - 281178 | 35217.5 |
| marr family transcriptional regulator | ISP_000274 | Not Available | Positive | 281221 - 281721 | 18444.2 |
| atp-binding protein | ISP_000275 | Not Available | Negative | 281735 - 282154 | 15229.4 |
| sigb/sigf/sigg family rna polymerase sigma factor | ISP_000276 | P9WGI2 | Negative | 282217 - 282996 | 28506.9 |
| anti-sigma factor | ISP_000277 | P9WGX6 | Negative | 282993 - 283409 | 14918.5 |
| whib family transcriptional regulator | ISP_000278 | A0QST8 | Positive | 283573 - 283881 | 11699.0 |
| stas domain-containing protein | ISP_000279 | P70877 | Positive | 284100 - 284453 | 12246.4 |
| metal-dependent hydrolase | ISP_000280 | Not Available | Positive | 284513 - 285301 | 27626.6 |
| hypothetical protein | ISP_000281 | Not Available | Negative | 285574 - 286005 | 14777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
