Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | ISP_002854 | F4I907 | Positive | 2993591 - 2994436 | 28588.1 |
| duf948 domain-containing protein | ISP_002855 | Not Available | Positive | 2994921 - 2995307 | 12992.0 |
| hypothetical protein | ISP_002856 | Not Available | Positive | 2995304 - 2995609 | 10720.8 |
| alanine--trna ligase | ISP_002857 | A4FBD3 | Positive | 2995682 - 2998342 | 95772.6 |
| holliday junction resolvase ruvx | ISP_002858 | A1UFI4 | Positive | 2998407 - 2998835 | 15033.0 |
| is30 family transposase | ISP_002859 | O34758 | Positive | 2998832 - 3001111 | 79508.7 |
| shikimate dehydrogenase | ISP_002860 | Q8DLA6 | Positive | 3001128 - 3001955 | 28176.7 |
| grpb family protein | ISP_002861 | Q9KBN7 | Positive | 3002019 - 3003299 | 47091.4 |
| tetr family transcriptional regulator | ISP_002862 | Q9KJC4 | Negative | 3003250 - 3003909 | 24777.8 |
| hypothetical protein | ISP_002863 | Not Available | Negative | 3003935 - 3004351 | 14756.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
