Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crcb family protein | ISP_002834 | Q47KF9 | Negative | 2967895 - 2968296 | 13542.0 |
| aminotransferase class v-fold plp-dependent enzyme | ISP_002835 | Q9Z3R1 | Positive | 2968439 - 2970040 | 53531.6 |
| sida/iucd/pvda family monooxygenase | ISP_002836 | Q9Z3Q8 | Positive | 2970037 - 2971314 | 45628.2 |
| iuca/iucc family protein | ISP_002837 | Q9Z3Q7 | Positive | 2971311 - 2973041 | 63506.5 |
| glutamine synthetase | ISP_002838 | O88070 | Positive | 2973038 - 2974345 | 45549.1 |
| fad-binding oxidoreductase | ISP_002839 | Q54H55 | Negative | 2974529 - 2975917 | 49843.9 |
| aaa family atpase | ISP_002840 | Q52999 | Negative | 2976000 - 2978993 | 106111.0 |
| si-specific nad(p)(+) transhydrogenase | ISP_002841 | P66007 | Positive | 2979084 - 2980493 | 50430.6 |
| hypothetical protein | ISP_002842 | Not Available | Positive | 2980512 - 2980694 | 6388.56 |
| intein-containing rv2578c family radical sam protein | ISP_002843 | P9WL78 | Positive | 2980751 - 2982640 | 68661.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
