Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulase family glycosylhydrolase | ISP_002824 | O54315 | Negative | 2958142 - 2959440 | 48016.6 |
| duf2252 domain-containing protein | ISP_002825 | Not Available | Negative | 2959525 - 2960883 | 49298.8 |
| ornithine--oxo-acid transaminase | ISP_002826 | Q7WP51 | Negative | 2961090 - 2962322 | 43165.4 |
| metalloregulator arsr/smtb family transcription factor | ISP_002827 | O53478 | Positive | 2962467 - 2962787 | 11439.6 |
| srpbcc family protein | ISP_002828 | Not Available | Positive | 2962784 - 2963251 | 17473.4 |
| polyphosphate--nucleotide phosphotransferase | ISP_002829 | M9XB82 | Positive | 2963269 - 2964120 | 31313.2 |
| prolyl oligopeptidase family serine peptidase | ISP_002830 | Q6F3I7 | Positive | 2964141 - 2966240 | 75505.8 |
| llm class f420-dependent oxidoreductase | ISP_002831 | O53565 | Positive | 2966237 - 2967187 | 34065.8 |
| fluoride efflux transporter crcb | ISP_002832 | Q9FC37 | Negative | 2967192 - 2967566 | 13014.0 |
| duf190 domain-containing protein | ISP_002833 | Q9FC38 | Negative | 2967563 - 2967895 | 12239.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
