Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glutamate gamma-semialdehyde dehydrogenase | ISP_002804 | O74766 | Positive | 2943211 - 2944839 | 58012.4 |
| proline dehydrogenase family protein | ISP_002805 | P94390 | Positive | 2944853 - 2945782 | 33578.9 |
| thioredoxin | ISP_002806 | Q9RD25 | Negative | 2945831 - 2946202 | 13717.0 |
| duf2630 family protein | ISP_002807 | P9WKP4 | Positive | 2946287 - 2946529 | 9078.5 |
| ycii family protein | ISP_002808 | Q52996 | Positive | 2946660 - 2947070 | 14884.4 |
| voc family protein | ISP_002809 | P52096 | Positive | 2947082 - 2947519 | 15784.1 |
| rna polymerase subunit sigma-24 | ISP_002810 | Q52997 | Positive | 2947523 - 2948665 | 40889.6 |
| alpha/beta hydrolase | ISP_002811 | P65824 | Negative | 2948810 - 2950357 | 52983.9 |
| atp-dependent dna ligase | ISP_002812 | L0TDE1 | Negative | 2950427 - 2951506 | 40403.2 |
| alkaline shock response membrane anchor protein amap | ISP_002813 | Not Available | Negative | 2951533 - 2952132 | 21197.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
