Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase msrb | ISP_002794 | Q6ADJ8 | Negative | 2934335 - 2934772 | 16073.8 |
| hypothetical protein | ISP_002795 | Not Available | Negative | 2934792 - 2935097 | 10929.0 |
| protein kinase | ISP_002796 | P65727 | Negative | 2935151 - 2936773 | 56224.6 |
| tvp38/tmem64 family protein | ISP_002797 | P9WFS2 | Negative | 2936941 - 2937603 | 21909.5 |
| dna polymerase domain-containing protein | ISP_002798 | A0R3R7 | Positive | 2937723 - 2938739 | 37923.8 |
| duf6221 family protein | ISP_002799 | Not Available | Positive | 2938992 - 2939384 | 14654.7 |
| llm class flavin-dependent oxidoreductase | ISP_002800 | O32254 | Positive | 2939421 - 2940419 | 35076.8 |
| s1 rna-binding domain-containing protein | ISP_002801 | A0QYY6 | Positive | 2940615 - 2940833 | 7832.41 |
| maleylpyruvate isomerase n-terminal domain-containing protein | ISP_002802 | Not Available | Negative | 2940864 - 2941520 | 23143.6 |
| helix-turn-helix domain-containing protein | ISP_002803 | P71073 | Negative | 2941540 - 2943093 | 54655.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
