Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | ISP_002784 | O32197 | Negative | 2924446 - 2925162 | 24767.8 |
| duf3000 domain-containing protein | ISP_002785 | Not Available | Negative | 2925884 - 2926447 | 20005.8 |
| uroporphyrinogen decarboxylase | ISP_002786 | A4FAS3 | Positive | 2926536 - 2927606 | 38104.1 |
| protoporphyrinogen oxidase | ISP_002787 | P0A5A8 | Positive | 2927603 - 2929003 | 47102.9 |
| chlorite dismutase family protein | ISP_002788 | O69830 | Positive | 2929061 - 2929753 | 26374.2 |
| coa transferase | ISP_002789 | A0A2I6PIZ1 | Positive | 2929753 - 2931090 | 47054.9 |
| hypothetical protein | ISP_002790 | Q82KZ4 | Negative | 2931234 - 2931572 | 12637.3 |
| duf692 domain-containing protein | ISP_002791 | O69833 | Negative | 2931569 - 2932369 | 28780.5 |
| tigr04222 domain-containing membrane protein | ISP_002792 | Not Available | Negative | 2932362 - 2933279 | 30086.5 |
| is30 family transposase | ISP_002793 | Not Available | Negative | 2933664 - 2934260 | 20797.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
