Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-binding protein | ISP_002764 | Q9HUI8 | Negative | 2898466 - 2900109 | 56644.5 |
| agmatinase | ISP_002765 | Q8KZT5 | Negative | 2900106 - 2901050 | 33737.9 |
| sodium:solute symporter | ISP_002766 | Q4L7L6 | Negative | 2901043 - 2902488 | 50546.5 |
| pucr family transcriptional regulator | ISP_002767 | P49694 | Positive | 2902587 - 2904089 | 52339.1 |
| response regulator transcription factor | ISP_002768 | P0A4I1 | Positive | 2904125 - 2904802 | 24135.0 |
| hamp domain-containing histidine kinase | ISP_002769 | P0A4I7 | Positive | 2904799 - 2905923 | 40052.4 |
| alpha/beta hydrolase | ISP_002770 | P95125 | Negative | 2906042 - 2907142 | 38674.1 |
| php domain-containing protein | ISP_002771 | Not Available | Negative | 2907136 - 2908671 | 55554.0 |
| hypothetical protein | ISP_002772 | Not Available | Positive | 2908742 - 2909170 | 15115.4 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | ISP_002773 | A8GH86 | Negative | 2909167 - 2911278 | 75213.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
