Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trka family potassium uptake protein | ISP_002754 | P9WFZ2 | Negative | 2886108 - 2886764 | 23434.1 |
| trka family potassium uptake protein | ISP_002755 | Q53949 | Negative | 2886761 - 2887426 | 23776.3 |
| apc family permease | ISP_002756 | P96589 | Positive | 2887519 - 2889552 | 73189.9 |
| tram domain-containing protein | ISP_002757 | Q93HB4 | Positive | 2889549 - 2890736 | 41705.5 |
| tigr03086 family metal-binding protein | ISP_002758 | P9WKS2 | Positive | 2890769 - 2891332 | 19614.1 |
| aldehyde dehydrogenase family protein | ISP_002759 | P71016 | Negative | 2891760 - 2893229 | 51988.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ISP_002760 | A4FAQ5 | Positive | 2893405 - 2895318 | 67371.5 |
| laci family transcriptional regulator | ISP_002761 | Q05954 | Positive | 2895434 - 2896444 | 36593.4 |
| hypothetical protein | ISP_002762 | Not Available | Positive | 2896566 - 2896871 | 11168.0 |
| gamma-aminobutyraldehyde dehydrogenase | ISP_002763 | Q6D6Y7 | Negative | 2897111 - 2898469 | 47986.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
