Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein glgx | ISP_002734 | P0A4Y5 | Positive | 2860357 - 2862483 | 79315.4 |
| malto-oligosyltrehalose synthase | ISP_002735 | Q44315 | Positive | 2862480 - 2864756 | 83213.2 |
| malto-oligosyltrehalose trehalohydrolase | ISP_002736 | Q9AJN6 | Positive | 2864753 - 2866465 | 63032.8 |
| glycogen debranching protein glgx | ISP_002737 | P0A4Y5 | Positive | 2866537 - 2868684 | 78460.6 |
| duf3416 domain-containing protein | ISP_002738 | Q9RP48 | Positive | 2869046 - 2871028 | 74144.4 |
| maltose alpha-d-glucosyltransferase | ISP_002739 | P9WQ18 | Positive | 2871067 - 2872875 | 68311.1 |
| phosphotransferase | ISP_002740 | Q7WUM3 | Positive | 2872881 - 2874260 | 50070.4 |
| 1,4-alpha-glucan branching protein glgb | ISP_002741 | Q0SGR9 | Positive | 2874257 - 2876464 | 81330.2 |
| hypothetical protein | ISP_002742 | Not Available | Positive | 2876642 - 2877034 | 14510.9 |
| rna polymerase sigma factor | ISP_002743 | P0A603 | Negative | 2877111 - 2878514 | 51695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
