Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | ISP_002724 | P37387 | Positive | 2847489 - 2848628 | 38305.4 |
| atp-binding cassette domain-containing protein | ISP_002725 | Q9F9B0 | Positive | 2849095 - 2849868 | 27517.1 |
| abc transporter permease | ISP_002726 | P0AGI6 | Positive | 2849889 - 2851352 | 49949.3 |
| rok family protein | ISP_002727 | P94490 | Positive | 2851364 - 2852545 | 40967.7 |
| hypothetical protein | ISP_002728 | Not Available | Negative | 2852701 - 2852880 | 6404.64 |
| eama family transporter | ISP_002729 | E1W9W8 | Positive | 2853223 - 2854026 | 27044.8 |
| glutamine synthetase | ISP_002730 | Q9KZC7 | Positive | 2854588 - 2855946 | 46960.5 |
| hypothetical protein | ISP_002731 | Not Available | Positive | 2855955 - 2856737 | 26668.9 |
| amino acid permease | ISP_002732 | Q797A7 | Negative | 2856715 - 2858178 | 51161.5 |
| 4-alpha-glucanotransferase | ISP_002733 | P65337 | Positive | 2858326 - 2860281 | 70396.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
