Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3099 domain-containing protein | ISP_002714 | Not Available | Positive | 2835596 - 2835910 | 11574.2 |
| sugar kinase | ISP_002715 | P26420 | Negative | 2835928 - 2836800 | 28998.5 |
| pseudouridine-5'-phosphate glycosidase | ISP_002716 | A4X4Y7 | Negative | 2836797 - 2837702 | 30825.9 |
| hypothetical protein | ISP_002717 | Not Available | Negative | 2837712 - 2838329 | 22686.5 |
| sporulation protein | ISP_002718 | P71088 | Negative | 2838329 - 2839114 | 28474.3 |
| duf3039 domain-containing protein | ISP_002719 | Not Available | Positive | 2839184 - 2839426 | 8641.32 |
| hypothetical protein | ISP_002720 | Not Available | Positive | 2839605 - 2840441 | 30020.3 |
| efflux rnd transporter permease subunit | ISP_002721 | O31501 | Negative | 2840569 - 2843709 | 107830.0 |
| yihy/virulence factor brkb family protein | ISP_002722 | O34437 | Negative | 2843806 - 2844960 | 41991.8 |
| dead/deah box helicase | ISP_002723 | P9WL20 | Positive | 2845205 - 2846941 | 63239.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
